TAP C3H in Capsella grandiflora

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

zf-CCCH
AP2
zf-C2H2
SRF-TF
two_or_more_Myb_DNA-binding

(Domain names are clickable)



List of proteins (45)

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namename additionClick button to show/hide sequence: Download sequence?
Cagra.0094s0010.1.ppacid=28912387 transcript=Cagra.0094s0010.1 locus=Cagra.0094s0010 ID=Cagra.0094s0010.1.v1.1 annot-version=v1.1
Cagra.0248s0008.1.ppacid=28918861 transcript=Cagra.0248s0008.1 locus=Cagra.0248s0008 ID=Cagra.0248s0008.1.v1.1 annot-version=v1.1
Cagra.0301s0088.1.ppacid=28907853 transcript=Cagra.0301s0088.1 locus=Cagra.0301s0088 ID=Cagra.0301s0088.1.v1.1 annot-version=v1.1
Cagra.0381s0001.1.ppacid=28893717 transcript=Cagra.0381s0001.1 locus=Cagra.0381s0001 ID=Cagra.0381s0001.1.v1.1 annot-version=v1.1
Cagra.0430s0043.1.ppacid=28917328 transcript=Cagra.0430s0043.1 locus=Cagra.0430s0043 ID=Cagra.0430s0043.1.v1.1 annot-version=v1.1
Cagra.0434s0021.1.ppacid=28897385 transcript=Cagra.0434s0021.1 locus=Cagra.0434s0021 ID=Cagra.0434s0021.1.v1.1 annot-version=v1.1
Cagra.0448s0051.1.ppacid=28906348 transcript=Cagra.0448s0051.1 locus=Cagra.0448s0051 ID=Cagra.0448s0051.1.v1.1 annot-version=v1.1
Cagra.0495s0060.1.ppacid=28897090 transcript=Cagra.0495s0060.1 locus=Cagra.0495s0060 ID=Cagra.0495s0060.1.v1.1 annot-version=v1.1
Cagra.0551s0024.1.ppacid=28898989 transcript=Cagra.0551s0024.1 locus=Cagra.0551s0024 ID=Cagra.0551s0024.1.v1.1 annot-version=v1.1
Cagra.0551s0039.1.ppacid=28898963 transcript=Cagra.0551s0039.1 locus=Cagra.0551s0039 ID=Cagra.0551s0039.1.v1.1 annot-version=v1.1
Cagra.0618s0003.1.ppacid=28914424 transcript=Cagra.0618s0003.1 locus=Cagra.0618s0003 ID=Cagra.0618s0003.1.v1.1 annot-version=v1.1
Cagra.0664s0084.1.ppacid=28911833 transcript=Cagra.0664s0084.1 locus=Cagra.0664s0084 ID=Cagra.0664s0084.1.v1.1 annot-version=v1.1
Cagra.0712s0020.1.ppacid=28899914 transcript=Cagra.0712s0020.1 locus=Cagra.0712s0020 ID=Cagra.0712s0020.1.v1.1 annot-version=v1.1
Cagra.0799s0006.1.ppacid=28899046 transcript=Cagra.0799s0006.1 locus=Cagra.0799s0006 ID=Cagra.0799s0006.1.v1.1 annot-version=v1.1
Cagra.0807s0009.1.ppacid=28916425 transcript=Cagra.0807s0009.1 locus=Cagra.0807s0009 ID=Cagra.0807s0009.1.v1.1 annot-version=v1.1
Cagra.0891s0057.1.ppacid=28912900 transcript=Cagra.0891s0057.1 locus=Cagra.0891s0057 ID=Cagra.0891s0057.1.v1.1 annot-version=v1.1
Cagra.0897s0006.1.ppacid=28902815 transcript=Cagra.0897s0006.1 locus=Cagra.0897s0006 ID=Cagra.0897s0006.1.v1.1 annot-version=v1.1
Cagra.0922s0006.1.ppacid=28901612 transcript=Cagra.0922s0006.1 locus=Cagra.0922s0006 ID=Cagra.0922s0006.1.v1.1 annot-version=v1.1
Cagra.0925s0010.1.ppacid=28917137 transcript=Cagra.0925s0010.1 locus=Cagra.0925s0010 ID=Cagra.0925s0010.1.v1.1 annot-version=v1.1
Cagra.0993s0051.1.ppacid=28903484 transcript=Cagra.0993s0051.1 locus=Cagra.0993s0051 ID=Cagra.0993s0051.1.v1.1 annot-version=v1.1
Cagra.1043s0016.1.ppacid=28897702 transcript=Cagra.1043s0016.1 locus=Cagra.1043s0016 ID=Cagra.1043s0016.1.v1.1 annot-version=v1.1
Cagra.1111s0013.1.ppacid=28918340 transcript=Cagra.1111s0013.1 locus=Cagra.1111s0013 ID=Cagra.1111s0013.1.v1.1 annot-version=v1.1
Cagra.1194s0020.1.ppacid=28912769 transcript=Cagra.1194s0020.1 locus=Cagra.1194s0020 ID=Cagra.1194s0020.1.v1.1 annot-version=v1.1
Cagra.1211s0017.1.ppacid=28915401 transcript=Cagra.1211s0017.1 locus=Cagra.1211s0017 ID=Cagra.1211s0017.1.v1.1 annot-version=v1.1
Cagra.13389s0004.1.ppacid=28907485 transcript=Cagra.13389s0004.1 locus=Cagra.13389s0004 ID=Cagra.13389s0004.1.v1.1 annot-version=v1.1
Cagra.1671s0119.1.ppacid=28914252 transcript=Cagra.1671s0119.1 locus=Cagra.1671s0119 ID=Cagra.1671s0119.1.v1.1 annot-version=v1.1
Cagra.1822s0091.1.ppacid=28905127 transcript=Cagra.1822s0091.1 locus=Cagra.1822s0091 ID=Cagra.1822s0091.1.v1.1 annot-version=v1.1
Cagra.1914s0035.1.ppacid=28901315 transcript=Cagra.1914s0035.1 locus=Cagra.1914s0035 ID=Cagra.1914s0035.1.v1.1 annot-version=v1.1
Cagra.1968s0078.1.ppacid=28910141 transcript=Cagra.1968s0078.1 locus=Cagra.1968s0078 ID=Cagra.1968s0078.1.v1.1 annot-version=v1.1
Cagra.2248s0023.1.ppacid=28917979 transcript=Cagra.2248s0023.1 locus=Cagra.2248s0023 ID=Cagra.2248s0023.1.v1.1 annot-version=v1.1
Cagra.2495s0002.1.ppacid=28895889 transcript=Cagra.2495s0002.1 locus=Cagra.2495s0002 ID=Cagra.2495s0002.1.v1.1 annot-version=v1.1
Cagra.2622s0030.1.ppacid=28895943 transcript=Cagra.2622s0030.1 locus=Cagra.2622s0030 ID=Cagra.2622s0030.1.v1.1 annot-version=v1.1
Cagra.2925s0033.1.ppacid=28896678 transcript=Cagra.2925s0033.1 locus=Cagra.2925s0033 ID=Cagra.2925s0033.1.v1.1 annot-version=v1.1
Cagra.2991s0039.1.ppacid=28900195 transcript=Cagra.2991s0039.1 locus=Cagra.2991s0039 ID=Cagra.2991s0039.1.v1.1 annot-version=v1.1
Cagra.3568s0002.1.ppacid=28905244 transcript=Cagra.3568s0002.1 locus=Cagra.3568s0002 ID=Cagra.3568s0002.1.v1.1 annot-version=v1.1
Cagra.3957s0020.1.ppacid=28914793 transcript=Cagra.3957s0020.1 locus=Cagra.3957s0020 ID=Cagra.3957s0020.1.v1.1 annot-version=v1.1
Cagra.4395s0219.1.ppacid=28898378 transcript=Cagra.4395s0219.1 locus=Cagra.4395s0219 ID=Cagra.4395s0219.1.v1.1 annot-version=v1.1
Cagra.5641s0032.1.ppacid=28908393 transcript=Cagra.5641s0032.1 locus=Cagra.5641s0032 ID=Cagra.5641s0032.1.v1.1 annot-version=v1.1
Cagra.5647s0054.1.ppacid=28905068 transcript=Cagra.5647s0054.1 locus=Cagra.5647s0054 ID=Cagra.5647s0054.1.v1.1 annot-version=v1.1
Cagra.7458s0012.1.ppacid=28916166 transcript=Cagra.7458s0012.1 locus=Cagra.7458s0012 ID=Cagra.7458s0012.1.v1.1 annot-version=v1.1
Cagra.8004s0002.1.ppacid=28919991 transcript=Cagra.8004s0002.1 locus=Cagra.8004s0002 ID=Cagra.8004s0002.1.v1.1 annot-version=v1.1
Cagra.8005s0013.1.ppacid=28901870 transcript=Cagra.8005s0013.1 locus=Cagra.8005s0013 ID=Cagra.8005s0013.1.v1.1 annot-version=v1.1
Cagra.8929s0001.1.ppacid=28904738 transcript=Cagra.8929s0001.1 locus=Cagra.8929s0001 ID=Cagra.8929s0001.1.v1.1 annot-version=v1.1
Cagra.9070s0001.1.ppacid=28909125 transcript=Cagra.9070s0001.1 locus=Cagra.9070s0001 ID=Cagra.9070s0001.1.v1.1 annot-version=v1.1
Cagra.9128s0003.1.ppacid=28909598 transcript=Cagra.9128s0003.1 locus=Cagra.9128s0003 ID=Cagra.9128s0003.1.v1.1 annot-version=v1.1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum